PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0015s0121.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family Trihelix
Protein Properties Length: 380aa    MW: 43007.4 Da    PI: 5.0383
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0015s0121.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix30.31.1e-0954141185
             trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 
                          +Wt+  v + ++   e+ ++++ ++l++++W ev + +      e+g   + kqC++k++ l+kr++++k++ + +   + s+++++ ++
  Mapoly0015s0121.1.p  54 EWTDVAVATFLDCFAEKYSNVKHKNLRGKDWMEVVDGLnkrcaPEGGPYYEYKQCRNKLDGLKKRFRQEKDSLSTN--SHPSRWQWYPRM 141
                          5*********************************9999999998999999************************85..66678****998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.8E-1553144No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MEETGEVAAL QQQEEEEQQQ QQEPQQQPCP TDTMSFQDLV NSADVKTPGQ GAAEWTDVAV  60
ATFLDCFAEK YSNVKHKNLR GKDWMEVVDG LNKRCAPEGG PYYEYKQCRN KLDGLKKRFR  120
QEKDSLSTNS HPSRWQWYPR MCDLKWARNM KMIEHGGGSG RVDKPEMSGD QAEGDGLVPD  180
EKDLNAGDRA GEVSMEDDAA WNKFRLVSTF PPKQKRKRRR AYVFNPSVPE IVAEGSRTRA  240
DLLPPCTPDN MSTLPDRPPL MQQFQKMPST DRTFKLRIRR PNETDCDDIF HFTGETVSDM  300
IESFKAVYWE EPATQIRVQL KEKFTEVWVT VAPSVSLSQY GSEALIITKP RGAYMPLTST  360
MASAPVMDKA LTACESVDP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1213219QKRKRRR
2214219KRKRRR
3215219RKRRR
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP4871684
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10030.23e-17Trihelix family protein